菅野一輝・鹿野雄一・厳島 怜・佐藤辰郎・皆川朋子 (2020) 平成 29 年 7 月九州北部豪雨の被災河川における魚類相. 応用生態工学 23：161-169

Rhynchocypris oxycephalus jouyi QS555-eDNA-W01

Unidentified No_PCR_Amplification

Rhynchocypris oxycephalus jouyi QS557-eDNA-W01

Rhinogobius sp./spp. (not yet identified) QS557-eDNA-W02

Odontobutis obscura QS557-eDNA-W03

Cyprinus carpio QS557-eDNA-W04

Rhynchocypris oxycephalus jouyi QS558-eDNA-W01

Rhinogobius sp./spp. (not yet identified) QS558-eDNA-W02

Rhynchocypris oxycephalus jouyi QS559-eDNA-W01

Rhinogobius sp./spp. (not yet identified) QS559-eDNA-W02

Candidia temminckii QS559-eDNA-W03

Unidentified No_PCR_Amplification

Unidentified No_PCR_Amplification

Rhynchocypris oxycephalus jouyi QS562-eDNA-W01

Odontobutis obscura QS562-eDNA-W02

Tribolodon hakonensis QS562-eDNA-W03

Cyprinus carpio QS562-eDNA-W04

Hemibarbus barbus QS562-eDNA-W05

Carassius auratus langsdorfii QS562-eDNA-W06

? Carassius auratus grandoculis QS562-eDNA-W07

QS555-eDNA

QS556-eDNA

QS557-eDNA

QS558-eDNA

QS559-eDNA

QS560-eDNA

QS561-eDNA

QS562-eDNA

QS563-eDNA

QS564-eDNA

QS565-eDNA

QS566-eDNA

QS567-eDNA

QS568-eDNA

QS569-eDNA

QS570-eDNA

QS571-eDNA

QS572-eDNA

QS573-eDNA

QS574-eDNA

本間義治 (1952) 新潟縣魚類目録. 魚類学雑誌 2:138-145

Lethenteron reissneri Sunayatsume_Niigata_Honma(1952-1966)

Lethenteron japonicum Kawayastume_Niigata_Honma(1952-1966)

Oncorhynchus masou masou Yamame_Niigata_Honma(1952-1966)

Oncorhynchus keta Sake_Niigata_Honma(1952-1966)

Salvelinus leucomaenis leucomaenis Amemasu_Niigata_Honma(1952-1966)

Salvelinus leucomaenis pluvius Iwana_Niigata_Honma(1952-1966)

Salvelinus fontinalis Kawamasu_Niigata_Honma(1952-1966)

Plecoglossus altivelis altivelis Ayu_Niigata_Honma(1952-1966)

Hypomesus nipponensis Wakasagi_Niigata_Honma(1952-1966)

Salangichthys microdon Shirauo_Niigata_Honma(1952-1966)

Silurus asotus Namazu_Niigata_Honma(1952-1966)

Liobagrus reinii (Clade 1) Akaza_Niigata_Honma(1952-1966)

Rhynchocypris lagowskii steindachneri Aburahaya_Niigata_Honma(1952-1966)

Tribolodon hakonensis Ugui_Niigata_Honma(1952-1966)

Zacco platypus Oikawa_Niigata_Honma(1952-1966)

Candidia temminckii Kawamutsu_Niigata_Honma(1952-1966)

Pseudogobio polysticta Kamastuka_Niigata_Honma(1952-1966)

Cyprinus carpio Koi_Niigata_Honma(1952-1966)

Carassius auratus Funa_Niigata_Honma(1952-1966)

Hemibarbus barbus Nigoi_Niigata_Honma(1952-1966)

st_Niigata_Honma(1952-1966)

黒田長禮 (1960) 諏訪湖産魚類新目録. 魚類学雑誌 8:35-46

Oncorhynchus masou ishikawae Amenouo_Suwako_Kuroda(1960)

Plecoglossus altivelis altivelis Ayu_Suwako_Kuroda(1960)

Hypomesus nipponensis Wakasagi_Suwako_Kuroda(1960)

Rhodeus ocellatus (hybrid) Baratanago_Suwako_Kuroda(1960)

Acheilognathus typus Zenitanago_Suwako_Kuroda(1960)

Sarcocheilichthys variegatus microoculus Higai_Suwako_Kuroda(1960)

Gnathopogon elongatus suwae Suwamoroko_Suwako_Kuroda(1960)

Gnathopogon caerulescens Honmoroko_Suwako_Kuroda(1960)

Pseudogobio esocinus esocinus Kamatsuka_Suwako_Kuroda(1960)

Hemibarbus barbus Nigoi_Suwako_Kuroda(1960)

Pseudorasbora parva Motsugo_Suwako_Kuroda(1960)

Tribolodon hakonensis Ugui_Suwako_Kuroda(1960)

Rhynchocypris lagowskii steindachneri Aburahaya_Suwako_Kuroda(1960)

Zacco platypus Oikawa_Suwako_Kuroda(1960)

Carassius auratus langsdorfii Funa_Suwako_Kuroda(1960)

Carassius auratus x gibelio Tetsugyo_Suwako_Kuroda(1960)

Cyprinus carpio Koi_Suwako_Kuroda(1960)

Ctenopharyngodon idella Sougyo_Suwako_Kuroda(1960)

Hypophthalmichthys molitrix Hakuren_Suwako_Kuroda(1960)

Misgurnus anguillicaudatus (Clade B1) Dojo_Suwako_Kuroda(1960)

st_Suwako_Kuroda(1960)

Oshima M (1957) List of the freshwater fishes obtained in the south-eastern Kiushiu. Japanese J...moreOshima M (1957) List of the freshwater fishes obtained in the south-eastern Kiushiu. Japanese Journal of Ichthyology 7:9-13

Oncorhynchus masou masou Yamame_Oshima(1957)

Plecoglossus altivelis altivelis Ayu_Oshima(1957)

Silurus asotus Namazu_Oshima(1957)

Pseudobagrus aurantiacus Ariakegibachi_Oshima(1957)

Oryzias latipes Medaka_Oshima(1957)

Rhodeus ocellatus kurumeus Baratanago_Oshima(1957)

Tanakia lanceolata Yaritanago_Oshima(1957)

Acheilognathus rhombeus Kanehira_Oshima(1957)

Acheilognathus tabira nakamurae Tabira_Oshima(1957)

Tanakia limbata Aburabote_Oshima(1957)

Hemibarbus barbus Nigoi_Oshima(1957)

Squalidus gracilis gracilis Itomoroko_Oshima(1957)

Gnathopogon caerulescens Honmoroko_Oshima(1957)

Pseudogobio esocinus Kamatsuka_Oshima(1957)

Sarcocheilichthys variegatus variegatus Higai_Oshima(1957)

Pseudorasbora parva Motsugo_Oshima(1957)

Tribolodon hakonensis Ugui_Oshima(1957)

Rhynchocypris oxycephalus jouyi Takahaya_Oshima(1957)

Zacco platypus Oikawa_Oshima(1957)

Carassius auratus langsdorfii Funa_Oshima(1957)

st_SE-Kyushu_Oshima(1957)

黒田長禮 (1953) 琵琶湖産魚類とその分布. 魚類学雑誌 2:271-284

Lethenteron reissneri Sunayatsume_Kuroda(1953)

Coregonus clupeaformis Shiromasu_Kuroda(1953)

Coregonus maraena Shinanoyukimasu_Kuroda(1953)

Coregonus baerii C_baerii_Kuroda(1953)

Oncorhynchus nerka nerka Himemasu_Kuroda(1953)

Oncorhynchus masou ishikawae Amago_Kuroda(1953)

Oncorhynchus keta Sake_Kuroda(1953)

Oncorhynchus masou masou Sakuramasu_Kuroda(1953)

Oncorhynchus gorbuscha Karafutomasu_Kuroda(1953)

Oncorhynchus mykiss Nijimasu_Kuroda(1953)

Salvelinus leucomaenis pluvius Iwana_Kuroda(1953)

Salvelinus fontinalis Kawamasu_Kuroda(1953)

Plecoglossus altivelis altivelis Ayu_Kuroda(1953)

Hypomesus nipponensis Wakasagi_Kuroda(1953)

Oryzias latipes Medaka_Kuroda(1953)

Silurus asotus Namazu_Kuroda(1953)

Pseudobagrus nudiceps Gigi_Kuroda(1953)

Liobagrus reini Akaza_Kuroda(1953)

Rhodeus ocellatus kurumeus Baratanago_Kuroda(1953)

Acheilognathus rhombeus Kanehira_Kuroda(1953)

st_Biwako_Kuroda(1953)

Oshima S (1957) Notes on the fishes collected in the down stream of Tama River, with descriptio...moreOshima S (1957) Notes on the fishes collected in the down stream of Tama River, with descriptions of two new species. Japanese Journal of Ichthyology 6:14-19

Lethenteron reissneri Sunayatsume_Oshima(1957)

Plecoglossus altivelis altivelis Ayu_Oshima(1957)

Oryzias latipes Medaka_Oshima(1957)

Silurus asotus Namazu_Oshima(1957)

Pseudobagrus tokiensis Gibachi_Oshima(1957)

? Rhodeus ocellatus (hybrid) Baratanago_Oshima(1957)

Tanakia lanceolata Yaritanago_Oshima(1957)

Hemibarbus barbus Nigoi_Oshima(1957)

Pseudogobio esocinus esocinus Kamatsuka_Oshima(1957)

Sarcocheilichthys variegatus microoculus Biwahigai_Oshima(1957)

Abbottina rivularis Tsuchifuki_Oshima(1957)

? Hemibarbus barbus Shiraimugitsuku_Oshima(1957)

? Sarcocheilichthys variegatus microoculus Tamabaya_Oshima(1957)

Pseudorasbora parva Motsugo_Oshima(1957)

Tribolodon hakonensis Ugui_Oshima(1957)

Zacco platypus Oikawa_Oshima(1957)

Carassius auratus langsdorfii Funa_Oshima(1957)

? Misgurnus anguillicaudatus (Clade B1) Dojo_Oshima(1957)

Cobitis sp. BIWAE type C Shimadojo_Oshima(1957)

Anguilla japonica Unagi_Oshima(1957)

st_Tamagawa_Oshima(1957)

鹿野雄一 (2009) 水辺の生き物 in 佐渡ヶ島. 九州大学流域システム工学研究室，福岡

Carassius auratus langsdorfii OYK138-W01

Cyprinus carpio OYK138-W02

Hemibarbus barbus OYK138-W03

Carassius cuvieri OYK138-W04

Pseudorasbora parva OYK138-W05

Gnathopogon elongatus elongatus OYK138-W06

OYK138_SadoKokufu

Kano Y, Ohnishi K, Tomida Y, Ikeda N, Iwawaki N, Miyagawa M, Harada Y, Ichiyanagi H, Watanabe K...moreKano Y, Ohnishi K, Tomida Y, Ikeda N, Iwawaki N, Miyagawa M, Harada Y, Ichiyanagi H, Watanabe K (2011) Fluctuation and variation in stream-fish assemblages after a catastrophic flood in the Miyagawa River, Japan. Environmental Biology of Fishes 92:447-460

Silurus tomodai OYK117-W01

Pseudobagrus nudiceps OYK117-W02

Hemibarbus labeo OYK117-W03

Rhynchocypris oxycephalus jouyi OYK117-W04

Anguilla japonica OYK117-W05

Zacco platypus OYK141-W01

Carassius auratus buergeri OYK141-W02

OYK117_Miyagawa

OYK141_Ohdai

鹿野雄一 (2009) 宮川 水と水辺の生き物. 大杉谷自然学校・大台町教育委員会 発行

Rhinogobius nagoyae OYK060-W01

Tridentiger brevispinis OYK060-W02

Carassius auratus langsdorfii OYK060-W04

Candidia temminckii OYK060-W05

Pseudobagrus ichikawai OYK060-W06

Pseudobagrus nudiceps OYK060-W07

Gloydius blomhoffii OYK091-W01

Rhabdophis tigrinus OYK091-W02

Bufo torrenticola OYK091-W03

Elaphe quadrivirgata OYK092-W01

Hemibarbus labeo OYK093-W01

Pseudobagrus ichikawai OYK093-W02

Cyprinus carpio OYK093-W03

Tribolodon hakonensis OYK093-W04

Cottus pollux complex (landlocked) OYK093-W05

Pseudogobio agathonectris OYK102-W01

Silurus tomodai OYK102-W02

Pseudobagrus nudiceps OYK102-W04

Rhacophorus arboreus OYK116-W01

Silurus tomodai OYK117-W01

OYK060_Miyagawa

OYK091_Ohdai

OYK092_Ohdai

OYK093_Ohdai

OYK102_Mie

OYK116_Miyagawa

OYK117_Miyagawa

OYK118_Ohdai

OYK128_Miyagawa

OYK132_Ikenotani

OYK141_Ohdai

Tabata, R., R. Kakioka, K. Tominaga, T. Komiya and K. Watanabe (2016) Phylogeny and historical ...moreTabata, R., R. Kakioka, K. Tominaga, T. Komiya and K. Watanabe (2016) Phylogeny and historical demography of endemic fishes in Lake Biwa: the ancient lake as a promoter of evolution and diversification of freshwater fishes in western Japan. Ecology and Evolution 6:2601-2623

Plecoglossus altivelis altivelis GEDIMAP-P2000 | P_altivelis_altivelis_Shiga_Hikone

Plecoglossus altivelis altivelis GEDIMAP-P2001 | P_altivelis_altivelis_Shiga_Moriyama

Oncorhynchus masou ssp. "Biwamasu" GEDIMAP-P2002 | O_masou_subsp__Shiga_Imazu

Oncorhynchus masou ssp. "Biwamasu" GEDIMAP-P2003 | O_masou_subsp__Shiga_Adogawa

Oncorhynchus masou ssp. "Biwamasu" GEDIMAP-P2004 | O_masou_subsp__Shiga_Okishima

Cobitis magnostriata C_sp__1_Shiga_Harie | GEDIMAP-P2005

Cobitis magnostriata C_sp__1_Shiga_HigashiOhmi | GEDIMAP-P2006

Cobitis minamorii oumiensis C_sp__2_subsp__4_Shiga_Harie | GEDIMAP-P2007

? Cobitis taenia/biwae (sp. complex) C_biwae_Shiga_Imazu | GEDIMAP-P2008

? Cobitis taenia/biwae (sp. complex) C_biwae_Shiga_Harie | GEDIMAP-P2009

Misgurnus anguillicaudatus (Clade B1) GEDIMAP-P2010 | M_anguillicaudatus_Shiga_Imazu

Misgurnus anguillicaudatus (Clade B1) GEDIMAP-P2011 | M_anguillicaudatus_Shiga_Harie

Acheilognathus rhombeus A_rhombeus_Shiga_Onoe | GEDIMAP-P2012

Acheilognathus rhombeus A_rhombeus_Shiga_Momose | GEDIMAP-P2013

Acheilognathus rhombeus A_rhombeus_Shiga_Harie | GEDIMAP-P2014

Acheilognathus rhombeus A_rhombeus_Shiga_Ado | GEDIMAP-P2015

Acheilognathus rhombeus A_rhombeus_Shiga_Daidoh | GEDIMAP-P2016

Acheilognathus rhombeus A_rhombeus_Shiga_Hino | GEDIMAP-P2017

Acheilognathus rhombeus A_rhombeus_Shiga_Imajuku | GEDIMAP-P2018

Acheilognathus tabira tabira A_tabira_tabira_Shiga_Onoe | GEDIMAP-P2019

Palt_01 (cyt-b) [5]

Palt_02 (cyt-b) [1]

Palt_03 (cyt-b) [5]

Palt_07 (cyt-b) [1]

Palt_08 (cyt-b) [1]

Palt_09 (cyt-b) [1]

Palt_10 (cyt-b) [1]

Palt_01 (cyt-b) [3]

Palt_03 (cyt-b) [2]

Palt_04 (cyt-b) [1]

Palt_05 (cyt-b) [2]

Palt_06 (cyt-b) [1]

Palt_07 (cyt-b) [1]

Palt_10 (cyt-b) [1]

OmLBW_01 (cyt-b) [13]

OmLBW_03 (cyt-b) [1]

OmLBW_04 (cyt-b) [3]

OmLBW_05 (cyt-b) [1]

OmLBW_06 (cyt-b) [8]

OmLBW_01 (cyt-b) [1]

st_Shiga_Hikone

st_Shiga_Moroyama

st_Shiga_Imazu

st_Shiga_Takashima

st_Shiga_Okishima

st_Shiga_Harie2

st_Shiga_Higashi-Ohmi

st_Shiga_Onoe

st_Shiga_Momose

st_Shiga_Harie

st_Shiga_Adogawa

st_Shiga_Daidoh

st_Shiga_Ohmi-Hachiman_Hino

st_Shiga_Imajuku

st_Shiga_Oura

st_Shiga_Kinomoto

st_Shiga_Ritto

st_Shiga_Takatsuki

st_Shiga_Higashiohmi

st_Hyogo_Sasayama

Tang, K. L., M. K. Agnew, W.-J. Chen, M. V. Hirt, M. E. Raley, T. Sado, L. M. Schneider, L. Yan...moreTang, K. L., M. K. Agnew, W.-J. Chen, M. V. Hirt, M. E. Raley, T. Sado, L. M. Schneider, L. Yang, H. L. Bart, S. He, H. Liu, M. Miya, K. Saitoh, A. M. Simons, R. M. Wooda, R. L. Mayden (2011) Phylogeny of the gudgeons (Teleostei: Cyprinidae: Gobioninae). Mol. Phylogenet. Evol., 61: 103-124.

Cobitis striata (sp. complex) GEDIMAP-P2899 | Suzisimadojou_LakeBiwa_Tang(2011)

Barbatula oreas GEDIMAP-P2900 | Hukudojo_Hokkaido_Tang(2011)

Lefua echigonia GEDIMAP-P2901 | Hotokedojo_Hino_Tang(2011)

Acheilognathus typus GEDIMAP-P2902 | Zenitanago_Hanamaki_Tang(2011)

Rhodeus ocellatus kurumeus GEDIMAP-P2903 | Nipponbaratanago_Yao_Tang(2011)

Tanakia limbata Aburabote_Okayama_Tang(2011) | GEDIMAP-P2904

Aphyocypris chinensis GEDIMAP-P2905 | Hinamoroko_Tanushimaru_Tang(2011)

Ischikauia steenackeri GEDIMAP-P2906 | Wataka_LakeBiwa_Tang(2011)

Opsariichthys uncirostris uncirostris GEDIMAP-P2907 | Hasu_Fukuoka_Tang(2011)

Zacco platypus GEDIMAP-P2908 | Oikawa_Okayama_Tang(2011)

Abbottina rivularis GEDIMAP-P2909 | Tuchihuki_Fukuoka_Tang(2011)

Gnathopogon elongatus elongatus GEDIMAP-P2910 | Tamoroko_LakeBiwa_Tang(2011)

Hemibarbus barbus GEDIMAP-P2911 | Nigoi_Sarugaishi_Tang(2011)

Pseudorasbora parva GEDIMAP-P2912 | Motsugo_Shimane_Tang(2011)

Pseudorasbora pumila pumila GEDIMAP-P2913 | Sinamotsugo_Kashimadai_Tang(2011)

Sarcocheilichthys variegatus microoculus Biwahigai_LakeBiwa_Tang(2011) | GEDIMAP-P2914

Squalidus gracilis gracilis GEDIMAP-P2915 | Itomoroko_Yabe_Tang(2011)

AB054125 (All mtDNA) [1]

EF458303 (Nucleotide) [1]

HM223938 (Nucleotide) [1]

EU711133 (Nucleotide) [1]

FJ197030 (Nucleotide) [1]

AB054126 (All mtDNA) [1]

EF458305 (Nucleotide) [1]

FJ197028 (Nucleotide) [1]

AB239602 (All mtDNA) [1]

EU292688 (Nucleotide) [1]

FJ197042 (Nucleotide) [1]

AB070205 (All mtDNA) [1]

EU711142 (Nucleotide) [1]

FJ197043 (Nucleotide) [1]

HM223952 (Nucleotide) [1]

HM224070 (Nucleotide) [1]

HM224190 (COI) [1]

HM224309 (cyt-b) [1]

AB218688 (All mtDNA) [1]

EU292692 (Nucleotide) [1]

st_LakeBiwa_Tang(2011)

st_Hokkaido_Tang(2011)

st_Hino_Tang(2011)

st_Hanamaki_Tang(2011)

st_Yao_Tang(2011)

st_Okayama_Tang(2011)

st_Tanushimaru_Tang(2011)

st_Fukuoka_Tang(2011)

st_Sarugaishi_Tang(2011)

st_Shimane_Tang(2011)

st_Kashimadai_Tang(2011)

st_Yabe_Tang(2011)

Yang K., S. He, J. Freyhof, K. Witte and H. Liu (2006) The phylogenetic relationships of the Go...moreYang K., S. He, J. Freyhof, K. Witte and H. Liu (2006) The phylogenetic relationships of the Gobioninae (Teleostei: Cyprinidae) inferred from mitochondrial cytochrome b gene sequences. Hydrobiologia, 553: 255-266

Biwia zezera B_zezera_Shiga_Otsu_913 | GEDIMAP-P913

Hemibarbus barbus GEDIMAP-P914 | H_barbus_China_Yangze

Pseudorasbora parva GEDIMAP-P915 | P_parva_China_Yangze

Pungtungia herzi GEDIMAP-P916 | P_herzi_Shiga_Koga

Sarcocheilichthys variegatus microoculus GEDIMAP-P917 | S_variegatus_microoculus_Shiga

Squalidus gracilis gracilis GEDIMAP-P918 | S_gracilis_gracilis_Shiga_Koga

Hypophthalmichthys molitrix GEDIMAP-P919 | H_molitrix_China_Yangze

Opsariichthys uncirostris uncirostris GEDIMAP-P920 | O_uncirostris_uncirostris_Shiga_Kusatsu

Rhodeus ocellatus ocellatus GEDIMAP-P921 | R_ocellatus_ocellatus_Unknown

Zacco platypus GEDIMAP-P922 | Z_platypus_Shiga_Kusatsu

B_zezera (cyt-b) [1]

H_labeo (cyt-b) [1]

P_parva (cyt-b) [1]

P_herzi (cyt-b) [1]

S_microocu (cyt-b) [1]

S_gracilis (cyt-b) [1]

H_molitrix (cyt-b) [1]

O_uncirost (cyt-b) [1]

R_ocellatu (cyt-b) [1]

Z_platypus (cyt-b) [1]

st_Shiga_Otsu

st_China_Yangze

st_Shiga_Koga2

st_Shiga_Biwako

st_Shiga_Koga

st_Shiga_Kusatsu

st_China_Unknown