黒田長禮 (1953) 琵琶湖産魚類とその分布. 魚類学雑誌 2:271-284

Sunayatsume_Kuroda(1953) (スナヤツメ（北方種or南方種）)

Shiromasu_Kuroda(1953) (レイクホワイトフィッシュ)

Shinanoyukimasu_Kuroda(1953) (シナノユキマス)

C_baerii_Kuroda(1953) (Coregonus baerii)

Himemasu_Kuroda(1953) (ベニザケ・ヒメマス)

Amago_Kuroda(1953) (アマゴ・サツキマス)

Sake_Kuroda(1953) (サケ)

Sakuramasu_Kuroda(1953) (ヤマメ・サクラマス)

Karafutomasu_Kuroda(1953) (カラフトマス)

Nijimasu_Kuroda(1953) (ニジマス)

Iwana_Kuroda(1953) (ニッコウイワナ)

Kawamasu_Kuroda(1953) (カワマス)

Ayu_Kuroda(1953) (アユ)

Wakasagi_Kuroda(1953) (ワカサギ)

Medaka_Kuroda(1953) (ミナミメダカ)

Namazu_Kuroda(1953) (ナマズ)

Gigi_Kuroda(1953) (ギギ)

Akaza_Kuroda(1953) (アカザ)

Baratanago_Kuroda(1953) (ニッポンバラタナゴ)

Kanehira_Kuroda(1953) (カネヒラ)

st_Biwako_Kuroda(1953)

Tabata, R., R. Kakioka, K. Tominaga, T. Komiya and K. Watanabe (2016) Phylogeny and historical ...moreTabata, R., R. Kakioka, K. Tominaga, T. Komiya and K. Watanabe (2016) Phylogeny and historical demography of endemic fishes in Lake Biwa: the ancient lake as a promoter of evolution and diversification of freshwater fishes in western Japan. Ecology and Evolution 6:2601-2623

GEDIMAP-P2000, P_altivelis_altivelis_Shiga_Hikone (アユ)

GEDIMAP-P2001, P_altivelis_altivelis_Shiga_Moriyama (アユ)

GEDIMAP-P2002, O_masou_subsp__Shiga_Imazu (ビワマス)

GEDIMAP-P2003, O_masou_subsp__Shiga_Adogawa (ビワマス)

GEDIMAP-P2004, O_masou_subsp__Shiga_Okishima (ビワマス)

C_sp__1_Shiga_Harie, GEDIMAP-P2005 (オオガタスジシマドジョウ)

C_sp__1_Shiga_HigashiOhmi, GEDIMAP-P2006 (オオガタスジシマドジョウ)

C_sp__2_subsp__4_Shiga_Harie, GEDIMAP-P2007 (ビワコガタスジシマドジョウ)

C_biwae_Shiga_Imazu, GEDIMAP-P2008 (シマドジョウ類)

C_biwae_Shiga_Harie, GEDIMAP-P2009 (シマドジョウ類)

GEDIMAP-P2010, M_anguillicaudatus_Shiga_Imazu (ドジョウ（日本在来系）)

GEDIMAP-P2011, M_anguillicaudatus_Shiga_Harie (ドジョウ（日本在来系）)

A_rhombeus_Shiga_Onoe, GEDIMAP-P2012 (カネヒラ)

A_rhombeus_Shiga_Momose, GEDIMAP-P2013 (カネヒラ)

A_rhombeus_Shiga_Harie, GEDIMAP-P2014 (カネヒラ)

A_rhombeus_Shiga_Ado, GEDIMAP-P2015 (カネヒラ)

A_rhombeus_Shiga_Daidoh, GEDIMAP-P2016 (カネヒラ)

A_rhombeus_Shiga_Hino, GEDIMAP-P2017 (カネヒラ)

A_rhombeus_Shiga_Imajuku, GEDIMAP-P2018 (カネヒラ)

A_tabira_tabira_Shiga_Onoe, GEDIMAP-P2019 (シロヒレタビラ)

Palt_01 (cyt-b) [5]

Palt_02 (cyt-b) [1]

Palt_03 (cyt-b) [5]

Palt_07 (cyt-b) [1]

Palt_08 (cyt-b) [1]

Palt_09 (cyt-b) [1]

Palt_10 (cyt-b) [1]

Palt_01 (cyt-b) [3]

Palt_03 (cyt-b) [2]

Palt_04 (cyt-b) [1]

Palt_05 (cyt-b) [2]

Palt_06 (cyt-b) [1]

Palt_07 (cyt-b) [1]

Palt_10 (cyt-b) [1]

OmLBW_01 (cyt-b) [13]

OmLBW_03 (cyt-b) [1]

OmLBW_04 (cyt-b) [3]

OmLBW_05 (cyt-b) [1]

OmLBW_06 (cyt-b) [8]

OmLBW_01 (cyt-b) [1]

st_Shiga_Hikone

st_Shiga_Moroyama

st_Shiga_Imazu

st_Shiga_Takashima

st_Shiga_Okishima

st_Shiga_Harie2

st_Shiga_Higashi-Ohmi

st_Shiga_Onoe

st_Shiga_Momose

st_Shiga_Harie

st_Shiga_Adogawa

st_Shiga_Daidoh

st_Shiga_Ohmi-Hachiman_Hino

st_Shiga_Imajuku

st_Shiga_Oura

st_Shiga_Kinomoto

st_Shiga_Ritto

st_Shiga_Takatsuki

st_Shiga_Higashiohmi

st_Hyogo_Sasayama

Wu,J.-H. and Chen,I.-S. (unpublished) .

GEDIMAP-P1335, Z_platypus_Kyoto (オイカワ)

GEDIMAP-P1336, Z_platypus_Kagoshima (オイカワ)

GEDIMAP-P1337, O_uncirostris_uncirostris_Shiga_Otsu (ハス)

GEDIMAP-P1339, O_bidens_Outside_Japan_Zheijiang (チョウセンハス)

GEDIMAP-P1343, Z_temminckii_Shiga_Hino (カワムツ)

GEDIMAP-P1345, Z_sieboldii_Shiga_Kusatsu (ヌマムツ)

ZPJ1 (CR) [1]

ZPJ2 (CR) [1]

OUJ1 (CR) [1]

OBC1 (CR) [1]

ZTJ1 (CR) [1]

ZTJ1 (CR) [1]

st_Kyoto

st_Kagoshima

st_Otsu

st_China

st_Hino

st_Kusatsu